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Growth at different pH (4. An oxidase test was carried out temp a t a filter paper soaked with temp a t substrate tetramethyl-p-phenylenediamine dihydrochloride, and coloration was documented (Jurtshuk Jr. Briefly, for cellular fatty acids analysis, 40 mg of bacterial cell pellet temp a t each strain was subjected to a series of four different reagents followed by saponification and methylation of fatty acids, thus enabling their cleavage from lipids.

The peaks obtained were then labeled, and the equivalent chain length (ECL) values were computed by the Sherlock software. The polar lipids profile was analyzed by extracting cells with methanol-chloroform-saline (2:1:0.

This study reports the isolation and identification temp a t four strains belonging to the family Methylobacteriaceae, collected from different locations on the ISS.

Three of the strains, referred to as IF7SW-B2T, IIF1SW-B5, and IIF4SW-B5, were identified based on the traditional and genomic taxonomic approaches. The fourth strain, which was isolated from a HEPA filter and referred to as I1-R3, was identified based on genomic analyses only. To confirm that three of the ISS strains (IF7SW-B2T, IIF1SW-B5, and IIF4SW-B5) belong to a novel species, their phylogenetic affiliations were analyzed with other species belonging to the genus Methylobacterium.

The sequence similarity of these three ISS temp a t with validly described Methylobacterium species was Tt Table 1) and temp a t gene with the closest being M. Tt analysis of these three ISS strains was carried out by constructing a maximum likelihood tree based on tepm rRNA (Figure 1), gyrB (Figure 2), atpD (Supplementary Figure 1), recA (Supplementary Figure 2), temp a t (Supplementary Figure 3), rpoB (Supplementary Figure 4), and glnI (Supplementary Temp a t 5) gene sequences.

In addition, MLSA was carried out by concatenating the six housekeeping genes manually (Figure 3). In addition, a phylogenetic tree based on WGS was generated pmid 4). The phylogenetic trees constructed based on all these genes, MLSA, and WGS showed that these three ISS strains (IF7SW-B2T, IIF1SW-B5, and IIF4SW-B5) are clustered together and Zyderm (Highly Purified Bovine Dermal Collagen Implant)- FDA the same clade with M.

The 16S rRNA gene-sequencing, housekeeping gene-based analyses, MLSA, and genome-based tree further supported the concept that temp a t three ISS strains belong to the same species but are closely related Tigan (Trimethobenzamide Hydrochloride Capsules)- FDA M.

In addition, the identity of the ISS strain I1-R3 was further confirmed to be M. Maximum likelihood phylogenetic tree based on 16S rRNA gene sequences shows the relationship of Methylobacterium ajmalii temp a t. Bootstrap values from 1,000 replications are shown at branch points.

Maximum likelihood phylogenetic tree, based on DNA gyrase gene (gyrB) sequences, showing the phylogenetic relationship temp a t Methylobacterium ajmalii sp. Maximum likelihood phylogenetic tree, based on six gene temp a t (atpD, recA, dnaK, rpoB, glnI, and temp a t concatenated manually, showing tt phylogenetic relationship of Temp a t ajmalii sp.

Genome-based phylogenetic tree tmp the phylogenetic relationship of Methylobacterium ajmalii sp. The genomes of the four isolated Temp a t strains were sequenced, with their draft genome assembled and annotated. The results are summarized in Table 1. The genome te,p in size from 6. Summary of the draft whole-genome sequences of four strains belonging to the family Methylobacteriaceae, isolated from the ISS.

Due to higher sequence similarities of three ISS strains with M. The ANI indices of three ISS strains (IF7SW-B2T, IIF1SW-B5, and IIF4SW-B5) with M. This suggested that these etmp ISS strains are novel species of the genus Methylobacterium. The entire genomes of these three ISS strains, M. As shown in Supplementary Figure 6, genomes of these three ISS strains aligned perfectly, while the closest genomes of M.

Since these three ISS strains were isolated at different time periods and from various locations, their persistence in the ISS environment and ecological significance in the temp a t systems warrant further study. Genomic analyses of Methylobacterium ajmalii in comparison to other species of the family Methylobacteriaceae.

The fourth strain I1-R3 was identified tekp M. The pigmentation of the strain I1-R3 (light pink) was also different from the novel ISS Methylobacterium strains (reddish pink). Hence, genomic and morphological analyses confirmed the phylogenetic affiliation of strain I1-R3 as M.

In this communication, phylogenetic affiliations of only IF7SW-B2T, IIF1SW-B5, and IIF4SW-B5 temp a t were presented. The minimal information about the ISS strain genome characteristics are given in Supplementary Table 2. The differential temp a t characteristics of IF7SW-B2T, IIF1SW-B5, and IIF4SW-B5 are listed in Table 3, in comparison with other related Methylobacterium species.

Three strains belonging to Methylobacterium sp. These strains grew well on nutrient agar and R2A. These strains were positive for assimilation of L-arabinose, D-glucose, maltose, D-mannitol, D-mannose, malic acid, potassium gluconate, and trisodium citrate.

These strains also exhibited esterase lipase and trypsin enzymatic activities. The complete results of phenotypic characteristics determined temp a t API 20 NE, API ZYM, and API 50 CH are detailed in Supplementary Tables 3-5, respectively.

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04.05.2019 in 21:35 Юлия:
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